J3_6SWA_021
3D structure
- PDB id
- 6SWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAACUAU*AUAG*CGAA
- Length
- 16 nucleotides
- Bulged bases
- 6SWA|1|q|A|1516, 6SWA|1|q|G|1623, 6SWA|1|q|A|1624
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SWA|1|q|U|1513
6SWA|1|q|G|1514
6SWA|1|q|A|1515
6SWA|1|q|A|1516
6SWA|1|q|C|1517
6SWA|1|q|U|1518
6SWA|1|q|A|1519
6SWA|1|q|U|1520
*
6SWA|1|q|A|1603
6SWA|1|q|U|1604
6SWA|1|q|A|1605
6SWA|1|q|G|1606
*
6SWA|1|q|C|1622
6SWA|1|q|G|1623
6SWA|1|q|A|1624
6SWA|1|q|A|1625
Current chains
- Chain q
- 28S ribosomal RNA (3612-MER)
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain M
- 60S ribosomal protein L15
- Chain h
- 60S ribosomal protein L37
Coloring options: