J3_6SWA_026
3D structure
- PDB id
- 6SWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGGGCGAGCC*GGCUCUCGCUUCUGGCGCCAAG*CGAC
- Length
- 36 nucleotides
- Bulged bases
- 6SWA|1|q|G|4084, 6SWA|1|q|C|4085, 6SWA|1|q|U|4086, 6SWA|1|q|U|4087, 6SWA|1|q|G|4090
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SWA|1|q|G|4062
6SWA|1|q|G|4063
6SWA|1|q|G|4064
6SWA|1|q|G|4065
6SWA|1|q|C|4066
6SWA|1|q|G|4067
6SWA|1|q|A|4068
6SWA|1|q|G|4069
6SWA|1|q|C|4070
6SWA|1|q|C|4071
*
6SWA|1|q|G|4077
6SWA|1|q|G|4078
6SWA|1|q|C|4079
6SWA|1|q|U|4080
6SWA|1|q|C|4081
6SWA|1|q|U|4082
6SWA|1|q|C|4083
6SWA|1|q|G|4084
6SWA|1|q|C|4085
6SWA|1|q|U|4086
6SWA|1|q|U|4087
6SWA|1|q|C|4088
6SWA|1|q|U|4089
6SWA|1|q|G|4090
6SWA|1|q|G|4091
6SWA|1|q|C|4092
6SWA|1|q|G|4093
6SWA|1|q|C|4094
6SWA|1|q|C|4095
6SWA|1|q|A|4096
6SWA|1|q|A|4097
6SWA|1|q|G|4098
*
6SWA|1|q|C|4117
6SWA|1|q|G|4118
6SWA|1|q|A|4119
6SWA|1|q|C|4120
Current chains
- Chain q
- 28S ribosomal RNA (3612-MER)
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain G
- 60S ribosomal protein L7a
- Chain V
- 60S ribosomal protein L23a
- Chain X
- 60S ribosomal protein L27
- Chain a
- 60S ribosomal protein L30
- Chain e
- 60S ribosomal protein L34
- Chain n
- 60S ribosomal protein L37a
Coloring options: