J3_6T4Q_031
3D structure
- PDB id
- 6T4Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AUAGCGUAACGGCUAUCACAU*GAGACC*GU
- Length
- 29 nucleotides
- Bulged bases
- 6T4Q|1|7|C|16, 6T4Q|1|7|G|17, 6T4Q|1|7|G|18, 6T4Q|1|7|C|19, 6T4Q|1|7|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6T4Q|1|7|A|7
6T4Q|1|7|U|8
6T4Q|1|7|A|9
6T4Q|1|7|G|10
6T4Q|1|7|C|11
6T4Q|1|7|G|12
6T4Q|1|7|U|13
6T4Q|1|7|A|14
6T4Q|1|7|A|15
6T4Q|1|7|C|16
6T4Q|1|7|G|17
6T4Q|1|7|G|18
6T4Q|1|7|C|19
6T4Q|1|7|U|20
6T4Q|1|7|A|21
6T4Q|1|7|U|22
6T4Q|1|7|C|23
6T4Q|1|7|A|24
6T4Q|1|7|C|25
6T4Q|1|7|A|26
6T4Q|1|7|U|27
*
6T4Q|1|7|G|43
6T4Q|1|7|A|44
6T4Q|1|7|G|45
6T4Q|1|7|A|46
6T4Q|1|7|C|47
6T4Q|1|7|C|48
*
6T4Q|1|7|G|64
6T4Q|1|7|U|65
Current chains
- Chain 7
- tRNA (E/E)
Nearby chains
- Chain Lo
- 60S ribosomal protein L42-A
- Chain SB
- 40S ribosomal protein S1-A
- Chain SF
- Rps5p
Coloring options: