J3_6T4Q_037
3D structure
- PDB id
- 6T4Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AGAUGG*CGUUUCAAAGGC*GCCACCAU
- Length
- 26 nucleotides
- Bulged bases
- 6T4Q|1|C1|C|1556, 6T4Q|1|C1|A|1558, 6T4Q|1|C1|C|1581
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6T4Q|1|C1|A|1537
6T4Q|1|C1|G|1538
6T4Q|1|C1|A|1539
6T4Q|1|C1|U|1540
6T4Q|1|C1|G|1541
6T4Q|1|C1|G|1542
*
6T4Q|1|C1|C|1551
6T4Q|1|C1|G|1552
6T4Q|1|C1|U|1553
6T4Q|1|C1|U|1554
6T4Q|1|C1|U|1555
6T4Q|1|C1|C|1556
6T4Q|1|C1|A|1557
6T4Q|1|C1|A|1558
6T4Q|1|C1|A|1559
6T4Q|1|C1|G|1560
6T4Q|1|C1|G|1561
6T4Q|1|C1|C|1562
*
6T4Q|1|C1|G|1577
6T4Q|1|C1|C|1578
6T4Q|1|C1|C|1579
6T4Q|1|C1|A|1580
6T4Q|1|C1|C|1581
6T4Q|1|C1|C|1582
6T4Q|1|C1|A|1583
6T4Q|1|C1|U|1584
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain C3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LA
- 60S ribosomal protein L2-A
- Chain LG
- 60S ribosomal protein L8-A
- Chain LN
- 60S ribosomal protein L15-A
- Chain LX
- 60S ribosomal protein L25
- Chain Lj
- 60S ribosomal protein L37-A
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