J3_6T7I_032
3D structure
- PDB id
- 6T7I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAAAUUUGAAAU*AGUUGUAAUUUGGAG*CGAAG
- Length
- 32 nucleotides
- Bulged bases
- 6T7I|1|C1|U|117, 6T7I|1|C1|G|120, 6T7I|1|C1|A|121, 6T7I|1|C1|U|147, 6T7I|1|C1|G|156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6T7I|1|C1|C|113
6T7I|1|C1|A|114
6T7I|1|C1|A|115
6T7I|1|C1|A|116
6T7I|1|C1|U|117
6T7I|1|C1|U|118
6T7I|1|C1|U|119
6T7I|1|C1|G|120
6T7I|1|C1|A|121
6T7I|1|C1|A|122
6T7I|1|C1|A|123
6T7I|1|C1|U|124
*
6T7I|1|C1|A|144
6T7I|1|C1|G|145
6T7I|1|C1|U|146
6T7I|1|C1|U|147
6T7I|1|C1|G|148
6T7I|1|C1|U|149
6T7I|1|C1|A|150
6T7I|1|C1|A|151
6T7I|1|C1|U|152
6T7I|1|C1|U|153
6T7I|1|C1|U|154
6T7I|1|C1|G|155
6T7I|1|C1|G|156
6T7I|1|C1|A|157
6T7I|1|C1|G|158
*
6T7I|1|C1|C|263
6T7I|1|C1|G|264
6T7I|1|C1|A|265
6T7I|1|C1|A|266
6T7I|1|C1|G|267
Current chains
- Chain C1
- 25S ribosomal RNA
Nearby chains
- Chain C3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LG
- 60S ribosomal protein L8-A
- Chain LL
- 60S ribosomal protein L13-A
- Chain LN
- 60S ribosomal protein L15-A
- Chain Lh
- 60S ribosomal protein L35-A
- Chain Li
- 60S ribosomal protein L36-A
Coloring options: