J3_6T83_021
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- AUCA*UAACUACUG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 6T83|1|2b|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6T83_021 not in the Motif Atlas
- Homologous match to J3_4V88_033
- Geometric discrepancy: 0.1314
- The information below is about J3_4V88_033
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_38616.1
- Basepair signature
- cWW-F-cWW-F-cWW-F-cWW-F-tWW-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
6T83|1|2b|A|881
6T83|1|2b|U|882
6T83|1|2b|C|883
6T83|1|2b|A|884
*
6T83|1|2b|U|928
6T83|1|2b|A|929
6T83|1|2b|A|930
6T83|1|2b|C|931
6T83|1|2b|U|932
6T83|1|2b|A|933
6T83|1|2b|C|934
6T83|1|2b|U|935
6T83|1|2b|G|936
*
6T83|1|2b|C|943
6T83|1|2b|A|944
6T83|1|2b|U|945
6T83|1|2b|U|946
6T83|1|2b|U|947
Current chains
- Chain 2b
- 18S rRNA
Nearby chains
- Chain Ba
- 40S ribosomal protein S1-A
- Chain Nb
- 40S ribosomal protein S13
- Chain Ob
- 40S ribosomal protein S14-A
- Chain ab
- 40S ribosomal protein S26-A
- Chain pb
- 60S ribosomal protein L43-A
Coloring options: