J3_6T83_028

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UGG*UUGUC*GAUAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T83|1|2b|U|1293
6T83|1|2b|G|1294
6T83|1|2b|G|1295
*
6T83|1|2b|U|1302
6T83|1|2b|U|1303
6T83|1|2b|G|1304
6T83|1|2b|U|1305
6T83|1|2b|C|1306
*
6T83|1|2b|G|1318
6T83|1|2b|A|1319
6T83|1|2b|U|1320
6T83|1|2b|A|1321
6T83|1|2b|A|1322

Current chains

Chain 2b

18S rRNA

Nearby chains

Chain Ab

40S ribosomal protein S0-A

Chain Cb

40S ribosomal protein S2

Chain Rb

40S ribosomal protein S17-B

Chain Vb

40S ribosomal protein S21-A