J3_6T83_054
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- AUCA*UAACUACUG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 6T83|1|a|A|929, 6T83|1|a|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6T83_054 not in the Motif Atlas
- Homologous match to J3_4V88_033
- Geometric discrepancy: 0.1782
- The information below is about J3_4V88_033
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_38616.1
- Basepair signature
- cWW-F-cWW-F-cWW-F-cWW-F-tWW-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
6T83|1|a|A|881
6T83|1|a|U|882
6T83|1|a|C|883
6T83|1|a|A|884
*
6T83|1|a|U|928
6T83|1|a|A|929
6T83|1|a|A|930
6T83|1|a|C|931
6T83|1|a|U|932
6T83|1|a|A|933
6T83|1|a|C|934
6T83|1|a|U|935
6T83|1|a|G|936
*
6T83|1|a|C|943
6T83|1|a|A|944
6T83|1|a|U|945
6T83|1|a|U|946
6T83|1|a|U|947
Current chains
- Chain a
- 18S rRNA
Nearby chains
- Chain 1
- 40S ribosomal protein S26-A
- Chain Da
- 60S ribosomal protein L2-A
- Chain aa
- 60S ribosomal protein L43-A
- Chain c
- 40S ribosomal protein S1-A
- Chain o
- 40S ribosomal protein S13
- Chain p
- 40S ribosomal protein S14-A
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