J3_6T83_077
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CAAAUUUGAAAU*AGUUGUAAUUUGGAG*CGAAG
- Length
- 32 nucleotides
- Bulged bases
- 6T83|1|Aa|U|117, 6T83|1|Aa|G|120, 6T83|1|Aa|A|121, 6T83|1|Aa|U|147, 6T83|1|Aa|G|156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6T83|1|Aa|C|113
6T83|1|Aa|A|114
6T83|1|Aa|A|115
6T83|1|Aa|A|116
6T83|1|Aa|U|117
6T83|1|Aa|U|118
6T83|1|Aa|U|119
6T83|1|Aa|G|120
6T83|1|Aa|A|121
6T83|1|Aa|A|122
6T83|1|Aa|A|123
6T83|1|Aa|U|124
*
6T83|1|Aa|A|144
6T83|1|Aa|G|145
6T83|1|Aa|U|146
6T83|1|Aa|U|147
6T83|1|Aa|G|148
6T83|1|Aa|U|149
6T83|1|Aa|A|150
6T83|1|Aa|A|151
6T83|1|Aa|U|152
6T83|1|Aa|U|153
6T83|1|Aa|U|154
6T83|1|Aa|G|155
6T83|1|Aa|G|156
6T83|1|Aa|A|157
6T83|1|Aa|G|158
*
6T83|1|Aa|C|263
6T83|1|Aa|G|264
6T83|1|Aa|A|265
6T83|1|Aa|A|266
6T83|1|Aa|G|267
Current chains
- Chain Aa
- 25S rRNA
Nearby chains
- Chain Ca
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Ja
- 60S ribosomal protein L8-A
- Chain Na
- 60S ribosomal protein L13-A
- Chain Pa
- 60S ribosomal protein L15-A
- Chain S
- 60S ribosomal protein L35-A
- Chain T
- 60S ribosomal protein L36-A
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