J3_6TH6_003

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

GG*CGCCAGUGG*CGC

Length

14 nucleotides

Bulged bases

6TH6|1|Aa|U|669

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TH6|1|Aa|G|618
6TH6|1|Aa|G|619
*
6TH6|1|Aa|C|663
6TH6|1|Aa|G|664
6TH6|1|Aa|C|665
6TH6|1|Aa|C|666
6TH6|1|Aa|A|667
6TH6|1|Aa|G|668
6TH6|1|Aa|U|669
6TH6|1|Aa|G|670
6TH6|1|Aa|G|671
*
6TH6|1|Aa|C|678
6TH6|1|Aa|G|679
6TH6|1|Aa|C|680

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ad

30S ribosomal protein S3Ae

Chain An

30S ribosomal protein S11

Chain Aq

30S ribosomal protein S15

Chain Bg

50S ribosomal protein L37Ae