J3_6TH6_004
3D structure
- PDB id
- 6TH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of T. kodakarensis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- CUAG*CGGAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 6TH6|1|Aa|U|821, 6TH6|1|Aa|A|823
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6TH6|1|Aa|C|772
6TH6|1|Aa|U|773
6TH6|1|Aa|A|774
6TH6|1|Aa|G|775
*
6TH6|1|Aa|C|807
6TH6|1|Aa|G|808
6TH6|1|Aa|G|809
6TH6|1|Aa|A|810
6TH6|1|Aa|G|811
*
6TH6|1|Aa|C|818
6TH6|1|Aa|G|819
6TH6|1|Aa|U|820
6TH6|1|Aa|U|821
6TH6|1|Aa|A|822
6TH6|1|Aa|A|823
6TH6|1|Aa|G|824
Current chains
- Chain Aa
- 16S ribosomal RNA
Nearby chains
- Chain Ab
- 30S ribosomal protein S2
- Chain Ag
- 30S ribosomal protein S5
- Chain Aj
- 30S ribosomal protein S8
- Chain Ao
- 30S ribosomal protein S12
- Chain Aq
- 30S ribosomal protein S15
- Chain Az
- Predicted zinc-ribbon RNA-binding protein involved in translation
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