J3_6TH6_007

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

GCGACGG*CGAGAG*CGAAAC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TH6|1|Aa|G|941
6TH6|1|Aa|C|942
6TH6|1|Aa|G|943
6TH6|1|Aa|A|944
6TH6|1|Aa|C|945
6TH6|1|Aa|G|946
6TH6|1|Aa|G|947
*
6TH6|1|Aa|C|986
6TH6|1|Aa|G|987
6TH6|1|Aa|A|988
6TH6|1|Aa|G|989
6TH6|1|Aa|A|990
6TH6|1|Aa|G|991
*
6TH6|1|Aa|C|1162
6TH6|1|Aa|G|1163
6TH6|1|Aa|A|1164
6TH6|1|Aa|A|1165
6TH6|1|Aa|A|1166
6TH6|1|Aa|C|1167

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ar

30S ribosomal protein S14 type Z