J3_6TH6_019

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

GGUG*CAAGC*GAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TH6|1|BA|G|1553
6TH6|1|BA|G|1554
6TH6|1|BA|U|1555
6TH6|1|BA|G|1556
*
6TH6|1|BA|C|1565
6TH6|1|BA|A|1566
6TH6|1|BA|A|1567
6TH6|1|BA|G|1568
6TH6|1|BA|C|1569
*
6TH6|1|BA|G|1728
6TH6|1|BA|A|1729
6TH6|1|BA|A|1730
6TH6|1|BA|C|1731

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BM

50S ribosomal protein L14e

Chain Be

50S ribosomal protein L34e