J3_6TH6_022

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CUCAG*CGUAGAGU*GCAAAAG

Length

20 nucleotides

Bulged bases

6TH6|1|BA|A|2437

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TH6|1|BA|C|2398
6TH6|1|BA|U|2399
6TH6|1|BA|C|2400
6TH6|1|BA|A|2401
6TH6|1|BA|G|2402
*
6TH6|1|BA|C|2420
6TH6|1|BA|G|2421
6TH6|1|BA|U|2422
6TH6|1|BA|A|2423
6TH6|1|BA|G|2424
6TH6|1|BA|A|2425
6TH6|1|BA|G|2426
6TH6|1|BA|U|2427
*
6TH6|1|BA|G|2434
6TH6|1|BA|C|2435
6TH6|1|BA|A|2436
6TH6|1|BA|A|2437
6TH6|1|BA|A|2438
6TH6|1|BA|A|2439
6TH6|1|BA|G|2440

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BF

50S ribosomal protein L5

Chain BQ

50S ribosomal protein L18

Chain BU

50S ribosomal protein L21e