J3_6TH6_028

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CAAG*CUAGUACC*GCGAAUACG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TH6|1|Aa|C|887
6TH6|1|Aa|A|888
6TH6|1|Aa|A|889
6TH6|1|Aa|G|890
*
6TH6|1|Aa|C|1296
6TH6|1|Aa|U|1297
6TH6|1|Aa|A|1298
6TH6|1|Aa|G|1299
6TH6|1|Aa|U|1300
6TH6|1|Aa|A|1301
6TH6|1|Aa|C|1302
6TH6|1|Aa|C|1303
*
6TH6|1|Aa|G|1323
6TH6|1|Aa|C|1324
6TH6|1|Aa|G|1325
6TH6|1|Aa|A|1326
6TH6|1|Aa|A|1327
6TH6|1|Aa|U|1328
6TH6|1|Aa|A|1329
6TH6|1|Aa|C|1330
6TH6|1|Aa|G|1331

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ai

30S ribosomal protein S7

Chain Al

30S ribosomal protein S9

Chain Av

30S ribosomal protein S19e

Chain Ay

30S ribosomal protein S28e