J3_6TH6_030

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CGC*GGACCGC*GAGGAAGGAG

Length

20 nucleotides

Bulged bases

6TH6|1|Aa|A|1135

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TH6|1|Aa|C|1060
6TH6|1|Aa|G|1061
6TH6|1|Aa|C|1062
*
6TH6|1|Aa|G|1107
6TH6|1|Aa|G|1108
6TH6|1|Aa|A|1109
6TH6|1|Aa|C|1110
6TH6|1|Aa|C|1111
6TH6|1|Aa|G|1112
6TH6|1|Aa|C|1113
*
6TH6|1|Aa|G|1127
6TH6|1|Aa|A|1128
6TH6|1|Aa|G|1129
6TH6|1|Aa|G|1130
6TH6|1|Aa|A|1131
6TH6|1|Aa|A|1132
6TH6|1|Aa|G|1133
6TH6|1|Aa|G|1134
6TH6|1|Aa|A|1135
6TH6|1|Aa|G|1136

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ai

30S ribosomal protein S7

Chain Al

30S ribosomal protein S9

Chain Am

30S ribosomal protein S10

Chain At

30S ribosomal protein S17e

Chain Ay

30S ribosomal protein S28e