J3_6TH6_037
3D structure
- PDB id
- 6TH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of T. kodakarensis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- GGCAAAAGCCGGCCUG*CC*GUGGC
- Length
- 23 nucleotides
- Bulged bases
- 6TH6|1|BA|A|2437, 6TH6|1|BA|A|2439, 6TH6|1|BA|U|2488
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6TH6|1|BA|G|2433
6TH6|1|BA|G|2434
6TH6|1|BA|C|2435
6TH6|1|BA|A|2436
6TH6|1|BA|A|2437
6TH6|1|BA|A|2438
6TH6|1|BA|A|2439
6TH6|1|BA|G|2440
6TH6|1|BA|C|2441
6TH6|1|BA|C|2442
6TH6|1|BA|G|2443
6TH6|1|BA|G|2444
6TH6|1|BA|C|2445
6TH6|1|BA|C|2446
6TH6|1|BA|U|2447
6TH6|1|BA|G|2448
*
6TH6|1|BA|C|2477
6TH6|1|BA|C|2478
*
6TH6|1|BA|G|2487
6TH6|1|BA|U|2488
6TH6|1|BA|G|2489
6TH6|1|BA|G|2490
6TH6|1|BA|C|2491
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain BF
- 50S ribosomal protein L5
- Chain BJ
- 50S ribosomal protein L10e
- Chain BQ
- 50S ribosomal protein L18
- Chain BU
- 50S ribosomal protein L21e
- Chain Bl
- 50S ribosomal protein L44e
Coloring options: