J3_6TMF_009

3D structure

PDB id

6TMF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an archaeal ABCE1-bound ribosomal post-splitting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UAC*GCGUC*GUAA

Length

12 nucleotides

Bulged bases

6TMF|1|A|A|1042

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TMF|1|A|U|1014
6TMF|1|A|A|1015
6TMF|1|A|C|1016
*
6TMF|1|A|G|1023
6TMF|1|A|C|1024
6TMF|1|A|G|1025
6TMF|1|A|U|1026
6TMF|1|A|C|1027
*
6TMF|1|A|G|1040
6TMF|1|A|U|1041
6TMF|1|A|A|1042
6TMF|1|A|A|1043

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain B

30S ribosomal protein S2

Chain G

30S ribosomal protein S5

Chain W

RNA-binding protein