J3_6TMF_013

3D structure

PDB id

6TMF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an archaeal ABCE1-bound ribosomal post-splitting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGG*CUUGG*CGACG

Length

13 nucleotides

Bulged bases

6TMF|1|A|U|596

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TMF|1|A|C|528
6TMF|1|A|G|529
6TMF|1|A|G|530
*
6TMF|1|A|C|594
6TMF|1|A|U|595
6TMF|1|A|U|596
6TMF|1|A|G|597
6TMF|1|A|G|598
*
6TMF|1|A|C|694
6TMF|1|A|G|695
6TMF|1|A|A|696
6TMF|1|A|C|697
6TMF|1|A|G|698

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain J

30S ribosomal protein S8

Chain O

30S ribosomal protein S12

Chain R

30S ribosomal protein S15

Chain S

30S ribosomal protein S17

Chain Y

30S ribosomal protein S27e