J3_6TNN_006

3D structure

PDB id

6TNN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

GGAUGUUG*CACCAUUUAAAG*CAC

Length

23 nucleotides

Bulged bases

6TNN|1|U|U|1105, 6TNN|1|U|A|1121

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TNN|1|U|G|1099
6TNN|1|U|G|1100
6TNN|1|U|A|1101
6TNN|1|U|U|1102
6TNN|1|U|G|1103
6TNN|1|U|U|1104
6TNN|1|U|U|1105
6TNN|1|U|G|1106
*
6TNN|1|U|C|1120
6TNN|1|U|A|1121
6TNN|1|U|C|1122
6TNN|1|U|C|1123
6TNN|1|U|A|1124
6TNN|1|U|U|1125
6TNN|1|U|U|1126
6TNN|1|U|U|1127
6TNN|1|U|A|1128
6TNN|1|U|A|1129
6TNN|1|U|A|1130
6TNN|1|U|G|1131
*
6TNN|1|U|C|1146
6TNN|1|U|A|1147
6TNN|1|U|C|1148

Current chains

Chain U

pre-23S rRNA

Nearby chains

Chain b

50S ribosomal protein L10

Chain t

50S ribosomal protein L36