J3_6TNN_009
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- UUG*CUAACC*GAGACAG
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6TNN_009 not in the Motif Atlas
- Homologous match to J3_4WF9_007
- Geometric discrepancy: 0.1661
- The information below is about J3_4WF9_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_07703.1
- Basepair signature
- cWW-cWW-tSH-F-F-F-F-F-cWW-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
6TNN|1|U|U|2118
6TNN|1|U|U|2119
6TNN|1|U|G|2120
*
6TNN|1|U|C|2223
6TNN|1|U|U|2224
6TNN|1|U|A|2225
6TNN|1|U|A|2226
6TNN|1|U|C|2227
6TNN|1|U|C|2228
*
6TNN|1|U|G|2249
6TNN|1|U|A|2250
6TNN|1|U|G|2251
6TNN|1|U|A|2252
6TNN|1|U|C|2253
6TNN|1|U|A|2254
6TNN|1|U|G|2255
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain W
- 50S ribosomal protein L2
- Chain u
- 50S ribosomal protein L28
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