J3_6UO1_083

3D structure

PDB id

6UO1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CUUGACAUG*CACAG*CUUACG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6UO1|1|2a|C|990
6UO1|1|2a|U|991
6UO1|1|2a|U|992
6UO1|1|2a|G|993
6UO1|1|2a|A|994
6UO1|1|2a|C|995
6UO1|1|2a|A|996
6UO1|1|2a|U|997
6UO1|1|2a|G|998
*
6UO1|1|2a|C|1043
6UO1|1|2a|A|1044
6UO1|1|2a|C|1045
6UO1|1|2a|A|1046
6UO1|1|2a|G|1047
*
6UO1|1|2a|C|1210
6UO1|1|2a|U|1211
6UO1|1|2a|U|1212
6UO1|1|2a|A|1213
6UO1|1|2a|C|1214
6UO1|1|2a|G|1215

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2n

30S ribosomal protein S14 type Z