3D structure

PDB id
6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
K.lactis 80S ribosome with p/PE tRNA and eIF5B
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
UGA*UAAUAGG*UCAUUA
Length
16 nucleotides
Bulged bases
6UZ7|1|2|U|863
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6UZ7|1|2|U|632
6UZ7|1|2|G|633
6UZ7|1|2|A|634
*
6UZ7|1|2|U|860
6UZ7|1|2|A|861
6UZ7|1|2|A|862
6UZ7|1|2|U|863
6UZ7|1|2|A|864
6UZ7|1|2|G|865
6UZ7|1|2|G|866
*
6UZ7|1|2|U|960
6UZ7|1|2|C|961
6UZ7|1|2|A|962
6UZ7|1|2|U|963
6UZ7|1|2|U|964
6UZ7|1|2|A|965

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain H
40S ribosomal protein S7
Chain L
KLLA0A10483p
Chain N
KLLA0F18040p
Chain W
40S ribosomal protein S22
Chain X
RPS23
Chain b
40S ribosomal protein S27

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.1308 s