J3_6UZ7_024
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAU*AAAUG*CUG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6UZ7_024 not in the Motif Atlas
- Homologous match to J3_5TBW_015
- Geometric discrepancy: 0.2228
- The information below is about J3_5TBW_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_48314.1
- Basepair signature
- cWW-cWW-F-cWW-F-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
6UZ7|1|5|C|3266
6UZ7|1|5|A|3267
6UZ7|1|5|U|3268
*
6UZ7|1|5|A|3282
6UZ7|1|5|A|3283
6UZ7|1|5|A|3284
6UZ7|1|5|U|3285
6UZ7|1|5|G|3286
*
6UZ7|1|5|C|3356
6UZ7|1|5|U|3357
6UZ7|1|5|G|3358
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AB
- 60S ribosomal protein L3
- Chain AP
- KLLA0A06336p
- Chain Bd
- KLLA0B02937p
Coloring options: