J3_6UZ7_027

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGAUAAAAAAUCAAUG*CUCCUUG*CAU

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6UZ7|1|2|A|212
6UZ7|1|2|G|213
6UZ7|1|2|A|214
6UZ7|1|2|U|215
6UZ7|1|2|A|216
6UZ7|1|2|A|217
6UZ7|1|2|A|218
6UZ7|1|2|A|219
6UZ7|1|2|A|220
6UZ7|1|2|A|221
6UZ7|1|2|U|222
6UZ7|1|2|C|223
6UZ7|1|2|A|224
6UZ7|1|2|A|225
6UZ7|1|2|U|226
6UZ7|1|2|G|227
*
6UZ7|1|2|C|236
6UZ7|1|2|U|237
6UZ7|1|2|C|238
6UZ7|1|2|C|239
6UZ7|1|2|U|240
6UZ7|1|2|U|241
6UZ7|1|2|G|242
*
6UZ7|1|2|C|249
6UZ7|1|2|A|250
6UZ7|1|2|U|251

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain E

40S ribosomal protein S4

Chain G

40S ribosomal protein S6

Chain L

KLLA0A10483p