J3_6UZ7_030

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUAAUUUG*CGGGGAAACUCACC*GGGCCG

Length

29 nucleotides

Bulged bases

6UZ7|1|2|G|1198, 6UZ7|1|2|G|1200, 6UZ7|1|2|A|1202

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6UZ7|1|2|C|1179
6UZ7|1|2|U|1180
6UZ7|1|2|U|1181
6UZ7|1|2|A|1182
6UZ7|1|2|A|1183
6UZ7|1|2|U|1184
6UZ7|1|2|U|1185
6UZ7|1|2|U|1186
6UZ7|1|2|G|1187
*
6UZ7|1|2|C|1196
6UZ7|1|2|G|1197
6UZ7|1|2|G|1198
6UZ7|1|2|G|1199
6UZ7|1|2|G|1200
6UZ7|1|2|A|1201
6UZ7|1|2|A|1202
6UZ7|1|2|A|1203
6UZ7|1|2|C|1204
6UZ7|1|2|U|1205
6UZ7|1|2|C|1206
6UZ7|1|2|A|1207
6UZ7|1|2|C|1208
6UZ7|1|2|C|1209
*
6UZ7|1|2|G|1451
6UZ7|1|2|G|1452
6UZ7|1|2|G|1453
6UZ7|1|2|C|1454
6UZ7|1|2|C|1455
6UZ7|1|2|G|1456

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain P

KLLA0F07843p

Chain Q

40S ribosomal protein S16

Chain S

KLLA0B01562p

Chain U

KLLA0F25542p

Chain d

40S ribosomal protein S29