J3_6UZ7_043
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AUAGAAG*CAUAGCAGG*CGAAUUGCAAUGUCAU
- Length
- 32 nucleotides
- Bulged bases
- 6UZ7|1|5|A|3140, 6UZ7|1|5|G|3141, 6UZ7|1|5|A|3183, 6UZ7|1|5|G|3184, 6UZ7|1|5|C|3185, 6UZ7|1|5|G|3187, 6UZ7|1|5|A|3236, 6UZ7|1|5|U|3238, 6UZ7|1|5|C|3240
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6UZ7|1|5|A|3138
6UZ7|1|5|U|3139
6UZ7|1|5|A|3140
6UZ7|1|5|G|3141
6UZ7|1|5|A|3142
6UZ7|1|5|A|3143
6UZ7|1|5|G|3144
*
6UZ7|1|5|C|3180
6UZ7|1|5|A|3181
6UZ7|1|5|U|3182
6UZ7|1|5|A|3183
6UZ7|1|5|G|3184
6UZ7|1|5|C|3185
6UZ7|1|5|A|3186
6UZ7|1|5|G|3187
6UZ7|1|5|G|3188
*
6UZ7|1|5|C|3233
6UZ7|1|5|G|3234
6UZ7|1|5|A|3235
6UZ7|1|5|A|3236
6UZ7|1|5|U|3237
6UZ7|1|5|U|3238
6UZ7|1|5|G|3239
6UZ7|1|5|C|3240
6UZ7|1|5|A|3241
6UZ7|1|5|A|3242
6UZ7|1|5|U|3243
6UZ7|1|5|G|3244
6UZ7|1|5|U|3245
6UZ7|1|5|C|3246
6UZ7|1|5|A|3247
6UZ7|1|5|U|3248
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AE
- KLLA0B04686p
- Chain AM
- KLLA0B13409p
- Chain AO
- KLLA0F04675p
- Chain AP
- KLLA0A06336p
- Chain Bf
- KLLA0D07405p
Coloring options: