J3_6UZ7_048
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AAC*GGACUA*UGGAAGUUU
- Length
- 18 nucleotides
- Bulged bases
- 6UZ7|1|2|U|1411, 6UZ7|1|2|U|1412
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6UZ7_048 not in the Motif Atlas
- Homologous match to J3_8CRE_085
- Geometric discrepancy: 0.1403
- The information below is about J3_8CRE_085
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_88233.1
- Basepair signature
- cWW-F-tWH-cWW-cWW-F-tSW-tWS-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
6UZ7|1|2|A|1335
6UZ7|1|2|A|1336
6UZ7|1|2|C|1337
*
6UZ7|1|2|G|1384
6UZ7|1|2|G|1385
6UZ7|1|2|A|1386
6UZ7|1|2|C|1387
6UZ7|1|2|U|1388
6UZ7|1|2|A|1389
*
6UZ7|1|2|U|1405
6UZ7|1|2|G|1406
6UZ7|1|2|G|1407
6UZ7|1|2|A|1408
6UZ7|1|2|A|1409
6UZ7|1|2|G|1410
6UZ7|1|2|U|1411
6UZ7|1|2|U|1412
6UZ7|1|2|U|1413
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain F
- KLLA0D10659p
- Chain Q
- 40S ribosomal protein S16
- Chain R
- KLLA0B01474p
- Chain U
- KLLA0F25542p
- Chain d
- 40S ribosomal protein S29
- Chain g
- KLLA0E12277p
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