J3_6V39_010

3D structure

PDB id

6V39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

GUA*UCUUAGUGAUCCG*CGCUCAAC

Length

24 nucleotides

Bulged bases

6V39|1|AN1|A|2422

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V39|1|AN1|G|2278
6V39|1|AN1|U|2279
6V39|1|AN1|A|2280
*
6V39|1|AN1|U|2380
6V39|1|AN1|C|2381
6V39|1|AN1|U|2382
6V39|1|AN1|U|2383
6V39|1|AN1|A|2384
6V39|1|AN1|G|2385
6V39|1|AN1|U|2386
6V39|1|AN1|G|2387
6V39|1|AN1|A|2388
6V39|1|AN1|U|2389
6V39|1|AN1|C|2390
6V39|1|AN1|C|2391
6V39|1|AN1|G|2392
*
6V39|1|AN1|C|2416
6V39|1|AN1|G|2417
6V39|1|AN1|C|2418
6V39|1|AN1|U|2419
6V39|1|AN1|C|2420
6V39|1|AN1|A|2421
6V39|1|AN1|A|2422
6V39|1|AN1|C|2423

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L33

Chain 2

50S ribosomal protein L35

Chain K

50S ribosomal protein L15

Chain V

50S ribosomal protein L27