J3_6V39_011

3D structure

PDB id

6V39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

CUCAG*CGUAGAG*CAAAAG

Length

18 nucleotides

Bulged bases

6V39|1|AN1|A|2330, 6V39|1|AN1|A|2332

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V39|1|AN1|C|2291
6V39|1|AN1|U|2292
6V39|1|AN1|C|2293
6V39|1|AN1|A|2294
6V39|1|AN1|G|2295
*
6V39|1|AN1|C|2313
6V39|1|AN1|G|2314
6V39|1|AN1|U|2315
6V39|1|AN1|A|2316
6V39|1|AN1|G|2317
6V39|1|AN1|A|2318
6V39|1|AN1|G|2319
*
6V39|1|AN1|C|2328
6V39|1|AN1|A|2329
6V39|1|AN1|A|2330
6V39|1|AN1|A|2331
6V39|1|AN1|A|2332
6V39|1|AN1|G|2333

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain F

50S ribosomal protein L5

Chain N

50S ribosomal protein L18

Chain V

50S ribosomal protein L27