J3_6V39_035

3D structure

PDB id

6V39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

ACAAG*CUAGUAA*UGAAUACGU

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V39|1|sN1|A|932
6V39|1|sN1|C|933
6V39|1|sN1|A|934
6V39|1|sN1|A|935
6V39|1|sN1|G|936
*
6V39|1|sN1|C|1341
6V39|1|sN1|U|1342
6V39|1|sN1|A|1343
6V39|1|sN1|G|1344
6V39|1|sN1|U|1345
6V39|1|sN1|A|1346
6V39|1|sN1|A|1347
*
6V39|1|sN1|U|1369
6V39|1|sN1|G|1370
6V39|1|sN1|A|1371
6V39|1|sN1|A|1372
6V39|1|sN1|U|1373
6V39|1|sN1|A|1374
6V39|1|sN1|C|1375
6V39|1|sN1|G|1376
6V39|1|sN1|U|1377

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9