J3_6V39_037

3D structure

PDB id

6V39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

AAACUUUC*GGAUUGGUGCC*GGAAU

Length

24 nucleotides

Bulged bases

6V39|1|sN1|C|1024

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V39|1|sN1|A|1000
6V39|1|sN1|A|1001
6V39|1|sN1|A|1002
6V39|1|sN1|C|1003
6V39|1|sN1|U|1004
6V39|1|sN1|U|1005
6V39|1|sN1|U|1006
6V39|1|sN1|C|1007
*
6V39|1|sN1|G|1015
6V39|1|sN1|G|1016
6V39|1|sN1|A|1017
6V39|1|sN1|U|1018
6V39|1|sN1|U|1019
6V39|1|sN1|G|1020
6V39|1|sN1|G|1021
6V39|1|sN1|U|1022
6V39|1|sN1|G|1023
6V39|1|sN1|C|1024
6V39|1|sN1|C|1025
*
6V39|1|sN1|G|1030
6V39|1|sN1|G|1031
6V39|1|sN1|A|1032
6V39|1|sN1|A|1033
6V39|1|sN1|U|1034

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14