J3_6V3A_014
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- ACCAUAG*CG*UCAU
- Length
- 13 nucleotides
- Bulged bases
- 6V3A|1|B|U|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6V3A_014 not in the Motif Atlas
- Homologous match to J3_7A0S_021
- Geometric discrepancy: 0.5164
- The information below is about J3_7A0S_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47324.1
- Basepair signature
- cWW-F-F-tSS-F-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
6V3A|1|B|A|8
6V3A|1|B|C|9
6V3A|1|B|C|10
6V3A|1|B|A|11
6V3A|1|B|U|12
6V3A|1|B|A|13
6V3A|1|B|G|14
*
6V3A|1|B|C|66
6V3A|1|B|G|67
*
6V3A|1|B|U|104
6V3A|1|B|C|105
6V3A|1|B|A|106
6V3A|1|B|U|107
Current chains
- Chain B
- 5s ribosomal RNA
Nearby chains
- Chain N
- 50S ribosomal protein L18
- Chain V
- 50S ribosomal protein L27
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