J3_6VLZ_006

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

UAGCUCU*ACCCCAG*CAAGUCA

Length

21 nucleotides

Bulged bases

6VLZ|1|AA|C|868, 6VLZ|1|AA|C|869, 6VLZ|1|AA|U|921

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VLZ|1|AA|U|674
6VLZ|1|AA|A|675
6VLZ|1|AA|G|676
6VLZ|1|AA|C|677
6VLZ|1|AA|U|678
6VLZ|1|AA|C|679
6VLZ|1|AA|U|680
*
6VLZ|1|AA|A|866
6VLZ|1|AA|C|867
6VLZ|1|AA|C|868
6VLZ|1|AA|C|869
6VLZ|1|AA|C|870
6VLZ|1|AA|A|871
6VLZ|1|AA|G|872
*
6VLZ|1|AA|C|917
6VLZ|1|AA|A|918
6VLZ|1|AA|A|919
6VLZ|1|AA|G|920
6VLZ|1|AA|U|921
6VLZ|1|AA|C|922
6VLZ|1|AA|A|923

Current chains

Chain AA

12s rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AO

28S ribosomal protein S18b, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial

Chain v

Elongation factor G, mitochondrial