J3_6VLZ_007

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GAUU*AUUAACCU*AGC

Length

15 nucleotides

Bulged bases

6VLZ|1|AA|A|688, 6VLZ|1|AA|A|826, 6VLZ|1|AA|C|828

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VLZ|1|AA|G|687
6VLZ|1|AA|A|688
6VLZ|1|AA|U|689
6VLZ|1|AA|U|690
*
6VLZ|1|AA|A|823
6VLZ|1|AA|U|824
6VLZ|1|AA|U|825
6VLZ|1|AA|A|826
6VLZ|1|AA|A|827
6VLZ|1|AA|C|828
6VLZ|1|AA|C|829
6VLZ|1|AA|U|830
*
6VLZ|1|AA|A|856
6VLZ|1|AA|G|857
6VLZ|1|AA|C|858

Current chains

Chain AA

12s rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial

Chain v

Elongation factor G, mitochondrial