J3_6VLZ_009

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

AGGA*UAC*GGAU

Length

11 nucleotides

Bulged bases

6VLZ|1|AA|G|1422

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6VLZ_009 not in the Motif Atlas

Homologous match to J3_6CZR_019

Geometric discrepancy: 0.5993

The information below is about J3_6CZR_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VLZ|1|AA|A|1198
6VLZ|1|AA|G|1199
6VLZ|1|AA|G|1200
6VLZ|1|AA|A|1201
*
6VLZ|1|AA|U|1364
6VLZ|1|AA|A|1365
6VLZ|1|AA|C|1366
*
6VLZ|1|AA|G|1421
6VLZ|1|AA|G|1422
6VLZ|1|AA|A|1423
6VLZ|1|AA|U|1424

Current chains

Chain AA

12s rRNA

Nearby chains

Chain A7

E-tRNA

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AG

28S ribosomal protein S9, mitochondrial