J3_6VMI_005

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

CUCU*ACCCCAG*CAAG

Length

15 nucleotides

Bulged bases

6VMI|1|AA|C|868, 6VMI|1|AA|C|869

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VMI|1|AA|C|677
6VMI|1|AA|U|678
6VMI|1|AA|C|679
6VMI|1|AA|U|680
*
6VMI|1|AA|A|866
6VMI|1|AA|C|867
6VMI|1|AA|C|868
6VMI|1|AA|C|869
6VMI|1|AA|C|870
6VMI|1|AA|A|871
6VMI|1|AA|G|872
*
6VMI|1|AA|C|917
6VMI|1|AA|A|918
6VMI|1|AA|A|919
6VMI|1|AA|G|920

Current chains

Chain AA

12s rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AO

28S ribosomal protein S18b, mitochondrial

Chain v

Elongation factor G, mitochondrial