J3_6VMI_008

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

CUC*GCAGUAA*UGAACAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VMI|1|AA|C|1192
6VMI|1|AA|U|1193
6VMI|1|AA|C|1194
*
6VMI|1|AA|G|1428
6VMI|1|AA|C|1429
6VMI|1|AA|A|1430
6VMI|1|AA|G|1431
6VMI|1|AA|U|1432
6VMI|1|AA|A|1433
6VMI|1|AA|A|1434
*
6VMI|1|AA|U|1456
6VMI|1|AA|G|1457
6VMI|1|AA|A|1458
6VMI|1|AA|A|1459
6VMI|1|AA|C|1460
6VMI|1|AA|A|1461
6VMI|1|AA|G|1462

Current chains

Chain AA

12s rRNA

Nearby chains

Chain A2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AG

28S ribosomal protein S9, mitochondrial