J3_6VMI_010

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

UGUAAUC*GAUCAACCUCAC*GCAA

Length

23 nucleotides

Bulged bases

6VMI|1|AA|U|1229

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VMI|1|AA|U|1210
6VMI|1|AA|G|1211
6VMI|1|AA|U|1212
6VMI|1|AA|A|1213
6VMI|1|AA|A|1214
6VMI|1|AA|U|1215
6VMI|1|AA|C|1216
*
6VMI|1|AA|G|1227
6VMI|1|AA|A|1228
6VMI|1|AA|U|1229
6VMI|1|AA|C|1230
6VMI|1|AA|A|1231
6VMI|1|AA|A|1232
6VMI|1|AA|C|1233
6VMI|1|AA|C|1234
6VMI|1|AA|U|1235
6VMI|1|AA|C|1236
6VMI|1|AA|A|1237
6VMI|1|AA|C|1238
*
6VMI|1|AA|G|1351
6VMI|1|AA|C|1352
6VMI|1|AA|A|1353
6VMI|1|AA|A|1354

Current chains

Chain AA

12s rRNA

Nearby chains

Chain AH

28S ribosomal protein S10, mitochondrial

Chain AK

28S ribosomal protein S14, mitochondrial

Chain v

Elongation factor G, mitochondrial