J3_6VMI_012

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

CAUUU*AAC*GUG

Length

11 nucleotides

Bulged bases

6VMI|1|AA|U|1369, 6VMI|1|AA|A|1383

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VMI|1|AA|C|1366
6VMI|1|AA|A|1367
6VMI|1|AA|U|1368
6VMI|1|AA|U|1369
6VMI|1|AA|U|1370
*
6VMI|1|AA|A|1382
6VMI|1|AA|A|1383
6VMI|1|AA|C|1388
*
6VMI|1|AA|G|1419
6VMI|1|AA|U|1420
6VMI|1|AA|G|1421

Current chains

Chain AA

12s rRNA

Nearby chains

Chain A7

P-site and E-site tRNA

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AX

28S ribosomal protein S29, mitochondrial