J3_6VWL_009
3D structure
- PDB id
- 6VWL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAG*UGUGC*GAAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6VWL|1|1|G|1003
6VWL|1|1|A|1004
6VWL|1|1|A|1005
6VWL|1|1|G|1006
*
6VWL|1|1|U|1023
6VWL|1|1|G|1024
6VWL|1|1|U|1025
6VWL|1|1|G|1026
6VWL|1|1|C|1027
*
6VWL|1|1|G|1034
6VWL|1|1|A|1035
6VWL|1|1|A|1036
6VWL|1|1|C|1037
Current chains
- Chain 1
- 16S ribosomal RNA
Nearby chains
- Chain m
- 30S ribosomal protein S14
Coloring options: