3D structure

PDB id
6W6K (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S-Activated-high-Mg2+
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GGGGUAGAAUUCCA*UGGAGGAAUACCGGUGG*CGGCCCC
Length
38 nucleotides
Bulged bases
6W6K|1|A|A|673, 6W6K|1|A|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6W6K|1|A|G|668
6W6K|1|A|G|669
6W6K|1|A|G|670
6W6K|1|A|G|671
6W6K|1|A|U|672
6W6K|1|A|A|673
6W6K|1|A|G|674
6W6K|1|A|A|675
6W6K|1|A|A|676
6W6K|1|A|U|677
6W6K|1|A|U|678
6W6K|1|A|C|679
6W6K|1|A|C|680
6W6K|1|A|A|681
*
6W6K|1|A|U|709
6W6K|1|A|G|710
6W6K|1|A|G|711
6W6K|1|A|A|712
6W6K|1|A|G|713
6W6K|1|A|G|714
6W6K|1|A|A|715
6W6K|1|A|A|716
6W6K|1|A|U|717
6W6K|1|A|A|718
6W6K|1|A|C|719
6W6K|1|A|C|720
6W6K|1|A|G|721
6W6K|1|A|G|722
6W6K|1|A|U|723
6W6K|1|A|G|724
6W6K|1|A|G|725
*
6W6K|1|A|C|732
6W6K|1|A|G|733
6W6K|1|A|G|734
6W6K|1|A|C|735
6W6K|1|A|C|736
6W6K|1|A|C|737
6W6K|1|A|C|738

Current chains

Chain A
16S rRNA

Nearby chains

Chain F
30S ribosomal protein S6
Chain K
30S ribosomal protein S11
Chain O
30S ribosomal protein S15
Chain R
30S ribosomal protein S18

Coloring options:

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