J3_6W7M_006

3D structure

PDB id

6W7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-high-Mg2+ + carbon layer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGGA*UAC*GGAA

Length

11 nucleotides

Bulged bases

6W7M|1|A|G|1338, 6W7M|1|A|A|1339

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6W7M_006 not in the Motif Atlas

Homologous match to J3_6CZR_019

Geometric discrepancy: 0.3633

The information below is about J3_6CZR_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W7M|1|A|U|943
6W7M|1|A|G|944
6W7M|1|A|G|945
6W7M|1|A|A|946
*
6W7M|1|A|U|1235
6W7M|1|A|A|1236
6W7M|1|A|C|1237
*
6W7M|1|A|G|1337
6W7M|1|A|G|1338
6W7M|1|A|A|1339
6W7M|1|A|A|1340

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain M

30S ribosomal protein S13