J3_6W7M_008

3D structure

PDB id

6W7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-high-Mg2+ + carbon layer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6W7M_008 not in the Motif Atlas

Homologous match to J3_5J7L_007

Geometric discrepancy: 0.3173

The information below is about J3_5J7L_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

6W7M|1|A|C|990
6W7M|1|A|U|991
6W7M|1|A|U|992
6W7M|1|A|G|993
*
6W7M|1|A|C|1045
6W7M|1|A|A|1046
6W7M|1|A|G|1047
*
6W7M|1|A|C|1210
6W7M|1|A|U|1211
6W7M|1|A|U|1212
6W7M|1|A|A|1213
6W7M|1|A|C|1214
6W7M|1|A|G|1215

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14