3D structure

PDB id
6W7M (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S-Inactive-high-Mg2+ + carbon layer
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
UAU*AGACUGC*GAGGAAGGUG
Length
20 nucleotides
Bulged bases
6W7M|1|A|C|1158, 6W7M|1|A|U|1159, 6W7M|1|A|U|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6W7M|1|A|U|1116
6W7M|1|A|A|1117
6W7M|1|A|U|1118
*
6W7M|1|A|A|1155
6W7M|1|A|G|1156
6W7M|1|A|A|1157
6W7M|1|A|C|1158
6W7M|1|A|U|1159
6W7M|1|A|G|1160
6W7M|1|A|C|1161
*
6W7M|1|A|G|1175
6W7M|1|A|A|1176
6W7M|1|A|G|1177
6W7M|1|A|G|1178
6W7M|1|A|A|1179
6W7M|1|A|A|1180
6W7M|1|A|G|1181
6W7M|1|A|G|1182
6W7M|1|A|U|1183
6W7M|1|A|G|1184

Current chains

Chain A
16S rRNA

Nearby chains

Chain B
30S ribosomal protein S2
Chain G
30S ribosomal protein S7
Chain I
30S ribosomal protein S9
Chain J
30S ribosomal protein S10
Chain N
30S ribosomal protein S14

Coloring options:

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