J3_6WD6_022

3D structure

PDB id

6WD6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAG*UGUGCC*GGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WD6|1|3|G|1003
6WD6|1|3|A|1004
6WD6|1|3|A|1005
6WD6|1|3|G|1006
*
6WD6|1|3|U|1023
6WD6|1|3|G|1024
6WD6|1|3|U|1025
6WD6|1|3|G|1026
6WD6|1|3|C|1027
6WD6|1|3|C|1028
*
6WD6|1|3|G|1033
6WD6|1|3|G|1034
6WD6|1|3|A|1035
6WD6|1|3|A|1036
6WD6|1|3|C|1037

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain S

30S ribosomal protein S14