J3_6WD9_029

3D structure

PDB id

6WD9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGAAGC*GCGCGAUACAG*CGUAC

Length

22 nucleotides

Bulged bases

6WD9|1|1|U|321, 6WD9|1|1|C|323

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WD9|1|1|G|297
6WD9|1|1|G|298
6WD9|1|1|A|299
6WD9|1|1|A|300
6WD9|1|1|G|301
6WD9|1|1|C|302
*
6WD9|1|1|G|315
6WD9|1|1|C|316
6WD9|1|1|G|317
6WD9|1|1|C|318
6WD9|1|1|G|319
6WD9|1|1|A|320
6WD9|1|1|U|321
6WD9|1|1|A|322
6WD9|1|1|C|323
6WD9|1|1|A|324
6WD9|1|1|G|325
*
6WD9|1|1|C|337
6WD9|1|1|G|338
6WD9|1|1|U|339
6WD9|1|1|A|340
6WD9|1|1|C|341

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain d

50S ribosomal protein L4

Chain u

50S ribosomal protein L24