3D structure

PDB id
6WDA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GAAG*UGUGCC*GGAAC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6WDA|1|3|G|1003
6WDA|1|3|A|1004
6WDA|1|3|A|1005
6WDA|1|3|G|1006
*
6WDA|1|3|U|1023
6WDA|1|3|G|1024
6WDA|1|3|U|1025
6WDA|1|3|G|1026
6WDA|1|3|C|1027
6WDA|1|3|C|1028
*
6WDA|1|3|G|1033
6WDA|1|3|G|1034
6WDA|1|3|A|1035
6WDA|1|3|A|1036
6WDA|1|3|C|1037

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain S
30S ribosomal protein S14

Coloring options:

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