J3_6WDF_029

3D structure

PDB id

6WDF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAAGC*GCGCGAUACAG*CGUAC

Length

22 nucleotides

Bulged bases

6WDF|1|1|U|321, 6WDF|1|1|C|323

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDF|1|1|G|297
6WDF|1|1|G|298
6WDF|1|1|A|299
6WDF|1|1|A|300
6WDF|1|1|G|301
6WDF|1|1|C|302
*
6WDF|1|1|G|315
6WDF|1|1|C|316
6WDF|1|1|G|317
6WDF|1|1|C|318
6WDF|1|1|G|319
6WDF|1|1|A|320
6WDF|1|1|U|321
6WDF|1|1|A|322
6WDF|1|1|C|323
6WDF|1|1|A|324
6WDF|1|1|G|325
*
6WDF|1|1|C|337
6WDF|1|1|G|338
6WDF|1|1|U|339
6WDF|1|1|A|340
6WDF|1|1|C|341

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain d

50S ribosomal protein L4

Chain u

50S ribosomal protein L24