J3_6WDG_017

3D structure

PDB id

6WDG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUA*UACCGGUGG*CGGC

Length

16 nucleotides

Bulged bases

6WDG|1|3|U|723

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDG|1|3|G|671
6WDG|1|3|U|672
6WDG|1|3|A|673
*
6WDG|1|3|U|717
6WDG|1|3|A|718
6WDG|1|3|C|719
6WDG|1|3|C|720
6WDG|1|3|G|721
6WDG|1|3|G|722
6WDG|1|3|U|723
6WDG|1|3|G|724
6WDG|1|3|G|725
*
6WDG|1|3|C|732
6WDG|1|3|G|733
6WDG|1|3|G|734
6WDG|1|3|C|735

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain K

30S ribosomal protein S6

Chain P

30S ribosomal protein S11

Chain T

30S ribosomal protein S15

Chain W

30S ribosomal protein S18

Chain Z

30S ribosomal protein S21